C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299540 RP3-420J14.1-001 ENSG00000215124 9606 - 6:11861626-11862970 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000299540
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000299540 0.181±0.00 0.509±0.00 0.181±0.00 0.198±0.03 0.052±0.00 0.182±0.00 0.558±0.22 0.524±0.00 0.168±0.06 0.107±0.00 0.131±0.11 0.107±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MP CIL_0008MP_0001 VISTA 6:11285786-11888473
CIL_00037U CIL_00037U_0001 CGP 6:11712054-12164999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072796 Amd-ps3-201 processed_pseudogene Mus_musculus 0 597
ENSMUST00000099945 Amd1-201 protein_coding Mus_musculus 0 592
ENSMUST00000080898 Amd2-201 protein_coding Mus_musculus 0 586
ENSMUST00000118392 Amd-ps4-001 processed_pseudogene Mus_musculus 0 579

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