C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284727 ATP5G3-001 ENSG00000154518 9606 - 2:175176258-175184607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000284727
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000284727 1.368±0.00 0.969±0.00 1.995±0.02 1.512±0.72 1.687±0.25 1.184±0.00 4.453±2.05 1.721±0.75 0.794±0.00 1.360±0.29 1.630±0.00 1.890±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0001H5 CIL_0001H5_0001 CGP 2:175176258-176002839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005739 IEA mitochondrion
GO:0005753 TAS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018914 Atp5g3-001 protein_coding Mus_musculus 0 987
ENSMUST00000111996 Atp5g3-002 protein_coding Mus_musculus 0 972
ENSMUST00000142768 Atp5g3-004 processed_transcript Mus_musculus 0 551
ENSMUST00000131045 Atp5g3-005 processed_transcript Mus_musculus 0 424
ENSMUST00000155474 Atp5g3-003 processed_transcript Mus_musculus 0 255
ENSMUST00000190725 RP23-72A20.8-001 processed_pseudogene Mus_musculus 0 213

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