C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270301 WDR62-006 ENSG00000075702 9606 + 19:36054972-36105103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungMuscleOvaryPlacentaTestisENST00000270301
Transcript ID Brain Colon Lung Muscle Ovary Placenta Testis
ENST00000270301 0.073±0.00 0.113±0.06 0.357±0.00 0.037±0.00 0.211±0.00 0.419±0.11 21.438±9.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0021987 IMP cerebral cortex development
GO:0022008 IMP neurogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108190 Wdr62-001 protein_coding Mus_musculus 0 3321
ENSMUST00000145027 Wdr62-002 nonsense_mediated_decay Mus_musculus 0 3321
ENSMUST00000134570 Wdr62-003 protein_coding Mus_musculus 0 1921
ENSMUST00000132483 Wdr62-005 retained_intron Mus_musculus 0 706
ENSMUST00000152543 Wdr62-007 processed_transcript Mus_musculus 0 278
ENSMUST00000014072 Thap8-201 protein_coding Mus_musculus 1e-38 167
ENSMUST00000108187 Thap8-001 protein_coding Mus_musculus 1e-38 167

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