C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263431 PRKCG-001 ENSG00000126583 9606 + 19:53882213-53907652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartOvaryTestisENST00000263431
Transcript ID Adipose Adrenal Brain Breast Colon Heart Ovary Testis
ENST00000263431 0.017±0.00 0.045±0.00 10.193±6.31 0.072±0.00 0.009±0.00 0.077±0.00 0.104±0.07 2.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M7 CIL_0004M7_0001 CGP 19:53866223-53907652
CIL_0005P4 CIL_0005P4_0001 CGP 19:53879190-53943941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA:IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004697 TAS:IEA protein kinase C activity
GO:0004698 IEA calcium-dependent protein kinase C activity
GO:0004712 IDA protein serine/threonine/tyrosine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 ISS plasma membrane
GO:0005911 IEA cell-cell junction
GO:0006468 TAS:IEA protein phosphorylation
GO:0006950 IEA response to stress
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007202 TAS activation of phospholipase C activity
GO:0007268 TAS synaptic transmission
GO:0007596 TAS blood coagulation
GO:0007611 IEA learning or memory
GO:0007635 IEA chemosensory behavior
GO:0008219 IEA cell death
GO:0008270 IEA zinc ion binding
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0016310 IDA phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030168 TAS platelet activation
GO:0030425 ISS dendrite
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0032425 IDA positive regulation of mismatch repair
GO:0035556 IEA intracellular signal transduction
GO:0042177 IDA negative regulation of protein catabolic process
GO:0043005 IEA neuron projection
GO:0043278 ISS response to morphine
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0045087 TAS innate immune response
GO:0046777 IEA protein autophosphorylation
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048265 ISS response to pain
GO:0048471 ISS perinuclear region of cytoplasm
GO:0060384 IEA innervation
GO:0097060 IEA synaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181455 PRKCG-202 protein_coding Mus_musculus 0 2719
ENSMUST00000100301 Prkcg-201 protein_coding Mus_musculus 0 2719
ENSMUST00000181221 PRKCG-201 protein_coding Mus_musculus 0 1303
ENSMUST00000172109 Prkcg-202 protein_coding Mus_musculus 0 1303
ENSMUST00000064921 Prkcb-003 protein_coding Mus_musculus 0 233
ENSMUST00000064989 Prkcb-001 protein_coding Mus_musculus 0 233
ENSMUST00000143692 Prkcb-002 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000059595 Prkca-001 protein_coding Mus_musculus 0 230
ENSDART00000137211 prkcba-002 protein_coding Danio_rerio 4.00001e-41 174
ENSDART00000006211 prkcba-001 protein_coding Danio_rerio 4.00001e-41 174
ENSDART00000142610 prkcg-001 protein_coding Danio_rerio 3e-38 165
ENSMUST00000134725 Prkca-002 processed_transcript Mus_musculus 3e-32 145
ENSMUST00000133383 Apoh-002 protein_coding Mus_musculus 0.000004 58

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