C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261415 COL4A3BP-003 ENSG00000113163 9606 - 5:75374158-75511629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryPlacentaTestisENST00000261415
Transcript ID Brain Lung Ovary Placenta Testis
ENST00000261415 3.126±0.00 6.216±0.00 4.666±0.00 9.449±0.00 21.870±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 TAS protein kinase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0006468 TAS protein phosphorylation
GO:0006665 TAS sphingolipid metabolic process
GO:0006955 NAS immune response
GO:0008289 IEA lipid binding
GO:0030148 TAS sphingolipid biosynthetic process
GO:0035620 IDA ceramide transporter activity
GO:0035621 IGI ER to Golgi ceramide transport
GO:0044281 TAS small molecule metabolic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0097001 IDA ceramide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109444 Col4a3bp-202 protein_coding Mus_musculus 0 2784
ENSMUST00000179226 Col4a3bp-203 protein_coding Mus_musculus 0 2730
ENSMUST00000077672 Col4a3bp-201 protein_coding Mus_musculus 0 1779
ENSDART00000092938 col4a3bpa-002 protein_coding Danio_rerio 0 556
ENSDART00000035299 col4a3bpa-201 protein_coding Danio_rerio 0 318
ENSDART00000149787 col4a3bpa-001 protein_coding Danio_rerio 0 318

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