C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 2 homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260264 POU2F3-006 ENSG00000137709 9606 + 11:120236640-120319944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverOvaryPlacentaENST00000260264
Transcript ID Adrenal Brain Heart Liver Ovary Placenta
ENST00000260264 0.062±0.00 0.042±0.00 0.025±0.00 0.011±0.00 0.067±0.00 0.152±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021Y CIL_00021Y_0002 CGP 11:120210767-120319944

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IMP RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0008544 TAS epidermis development
GO:0030216 IEA keratinocyte differentiation
GO:0042060 IEA wound healing
GO:0043565 IDA sequence-specific DNA binding
GO:0043922 IDA negative regulation by host of viral transcription
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176636 Pou2f3-002 protein_coding Mus_musculus 0 1576
ENSMUST00000034513 Pou2f3-001 protein_coding Mus_musculus 0 1576
ENSMUST00000120271 Pou2f3-rs1-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000176408 Pou2f2-010 protein_coding Mus_musculus 0 272
ENSMUST00000108413 Pou2f2-007 protein_coding Mus_musculus 0 272
ENSMUST00000108416 Pou2f2-008 protein_coding Mus_musculus 0 272
ENSMUST00000108417 Pou2f2-002 protein_coding Mus_musculus 0 272
ENSMUST00000108418 Pou2f2-004 protein_coding Mus_musculus 0 272
ENSMUST00000098679 Pou2f2-003 protein_coding Mus_musculus 0 272
ENSMUST00000108415 Pou2f2-005 protein_coding Mus_musculus 0 272
ENSMUST00000175774 Pou2f2-001 protein_coding Mus_musculus 0 272
ENSMUST00000053491 Pou3f1-001 protein_coding Mus_musculus 8e-33 147
ENSMUST00000054883 Pou3f3-001 protein_coding Mus_musculus 0.00000000004 75

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