C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257981 KCNH3-001 ENSG00000135519 9606 + 12:49539157-49558308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungENST00000257981
Transcript ID Bladder Brain Liver Lung
ENST00000257981 0.239±0.00 11.406±5.38 0.121±0.00 1.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009M CIL_00009M_0001 CGP 12:49366584-49558308
CIL_00009P CIL_00009P_0001 CGP 12:49539157-49568153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0004871 IEA signal transducer activity
GO:0005216 IEA ion channel activity
GO:0005249 TAS voltage-gated potassium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007165 IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041415 Kcnh3-201 protein_coding Mus_musculus 0 3995
ENSDART00000153763 KCNH4 (2 of 2)-001 protein_coding Danio_rerio 0 420
ENSDART00000090810 kcnh8-001 protein_coding Danio_rerio 0 283
ENSMUST00000039366 Kcnh8-001 protein_coding Mus_musculus 0 206

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