C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254908 PCBD2-001 ENSG00000132570 9606 + 5:134904906-134961277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000254908
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000254908 1.098±0.00 1.927±0.00 0.909±0.39 1.611±0.85 0.944±0.00 5.153±0.00 2.281±1.28 1.652±0.07 1.008±0.00 4.709±0.97 1.754±0.09 1.454±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JT CIL_0007JT_0002 UCNEbase 5:134524545-135264654
CIL_0009AP CIL_0009AP_0001 VISTA 5:134719818-135321709
CIL_0005XS CIL_0005XS_0001 CGP 5:134873803-135007959
CIL_0005XV CIL_0005XV_0001 CGP 5:134904906-135011707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0006729 IEA tetrahydrobiopterin biosynthetic process
GO:0008124 IEA 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000006 57
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00008 53

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