C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and fibronectin type III domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248668 LRFN1-001 ENSG00000128011 9606 - 19:39306568-39315336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248668
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248668 1.277±0.00 4.156±0.00 0.698±0.00 1.213±0.00 0.386±0.00 0.078±0.04 0.969±0.96 0.071±0.00 1.663±0.96 0.707±0.38 0.361±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108288 Lrfn1-003 protein_coding Mus_musculus 0 2575
ENSMUST00000191267 Lrfn1-002 retained_intron Mus_musculus 0 1557
ENSMUST00000055110 Lrfn1-201 protein_coding Mus_musculus 0 1555
ENSMUST00000189877 Lrfn1-001 protein_coding Mus_musculus 0 1555
ENSMUST00000190954 Lrfn1-004 protein_coding Mus_musculus 0 736
ENSDART00000105175 LRFN5 (1 of 2)-001 protein_coding Danio_rerio 3e-33 148

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