C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 59
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000234831 TMEM59-001 ENSG00000116209 9606 - 1:54031676-54053438 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234831 74.824±0.00 67.031±0.00 19.355±0.00 60.010±24.18 73.933±36.71 88.953±38.47 31.942±20.14 83.216±28.73 46.887±17.73 64.996±28.53 16.812±11.59 53.146±21.81 105.335±22.88 74.067±42.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000137 IDA Golgi cis cisterna
GO:0000138 IDA Golgi trans cisterna
GO:0004175 IEA endopeptidase activity
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0005515 IPI protein binding
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005797 IDA Golgi medial cisterna
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0006914 IEA autophagy
GO:0010508 IMP positive regulation of autophagy
GO:0010955 IDA negative regulation of protein processing
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0090005 IDA negative regulation of establishment of protein localization to plasma membrane
GO:0090285 IDA negative regulation of protein glycosylation in Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030361 Tmem59-001 protein_coding Mus_musculus 0 1581
ENSMUST00000127652 Tmem59-002 processed_transcript Mus_musculus 0 1277
ENSMUST00000106753 Tmem59-005 protein_coding Mus_musculus 0 905
ENSMUST00000154007 Tmem59-006 nonsense_mediated_decay Mus_musculus 0 878
ENSMUST00000141013 Tmem59-003 retained_intron Mus_musculus 0 774
ENSMUST00000128123 Tmem59-004 protein_coding Mus_musculus 0 501

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