C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7734
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182832 Gm7734-001 ENSMUSG00000098236 10090 + 14:32897719-32898729 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182832
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182832 0.119±0.04 0.083±0.00 0.027±0.00 0.024±0.00 0.272±0.16 0.046±0.02 0.044±0.02 0.047±0.04 0.093±0.07 0.194±0.08 0.051±0.02 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0002 VISTA 14:32298253-32899721
CIL_0008ZL CIL_0008ZL_0002 VISTA 14:32470674-33071522
CIL_0007OS CIL_0007OS_0003 UCNEbase 14:32546905-33068248
CIL_0006H6 CIL_0006H6_0002 CGP 14:32856756-33185508

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 444
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 361
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 320
ENSDART00000148397 gapdh-005 retained_intron Danio_rerio 0 261
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 870
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 658
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 859
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 870
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 870
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 675
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 604
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 619
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 763
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 505
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 477
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 475
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 342
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 824
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 370
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 658
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 658
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 669
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 656
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 708
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 693
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 789

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