C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 21992
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179909 Gm21992-002 ENSMUSG00000096370 10090 - 19:4785152-4811508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000179909
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000179909 13.876±3.93 24.924±3.43 10.117±0.00 12.112±1.58 27.790±0.00 8.221±2.71 17.895±1.27 15.316±3.19 15.141±0.00 39.307±3.03 15.128±2.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YM CIL_0003YM_0006 CGP 19:4742913-4811612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310092 RBM4-001 protein_coding Homo_sapiens 0 1369
ENST00000310137 RBM14-001 protein_coding Homo_sapiens 0 468
ENST00000393979 RBM14-002 protein_coding Homo_sapiens 0 468
ENST00000398692 RBM4-010 protein_coding Homo_sapiens 0 348
ENST00000408993 RBM4-002 protein_coding Homo_sapiens 0 1358
ENST00000409372 RBM14-003 protein_coding Homo_sapiens 0 470
ENST00000409406 RBM4-003 protein_coding Homo_sapiens 0 1365
ENST00000409738 RBM14-014 protein_coding Homo_sapiens 0 470
ENST00000412278 RBM14-RBM4-004 protein_coding Homo_sapiens 0 1831
ENST00000421355 RBM14-RBM4-003 nonsense_mediated_decay Homo_sapiens 0 1031
ENST00000443702 RBM14-004 protein_coding Homo_sapiens 0 470
ENST00000500635 RBM14-RBM4-002 protein_coding Homo_sapiens 0 470
ENST00000510173 RBM4-014 protein_coding Homo_sapiens 0 300
ENST00000511114 RBM14-RBM4-005 processed_transcript Homo_sapiens 0 470
ENST00000512283 RBM14-013 processed_transcript Homo_sapiens 0 470
ENST00000515838 RBM4-015 processed_transcript Homo_sapiens 0 501
ENST00000528039 RBM4-012 processed_transcript Homo_sapiens 0 348
ENST00000530235 RBM4-013 protein_coding Homo_sapiens 0 339

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