C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17511
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172206 Gm17511-201 ENSMUSG00000090460 10090 - 7:127286041-127286385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverOvaryPlacentaTestisENSMUST00000172206
Transcript ID Adipose Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000172206 0.907±0.51 0.351±0.14 0.255±0.07 0.203±0.10 0.471±0.22 0.316±0.24 1.511±0.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260379 RPLP1-001 protein_coding Homo_sapiens 0 444
ENST00000357790 RPLP1-002 protein_coding Homo_sapiens 0 263
ENST00000398740 RP11-120J4.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000405359 AC016739.2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000423096 AC008753.3-001 processed_pseudogene Homo_sapiens 6e-20 100
ENST00000437248 RP11-435F13.2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000453002 RPLP1P11-001 processed_pseudogene Homo_sapiens 0 357
ENST00000470649 TTC19-010 protein_coding Homo_sapiens 0 357
ENST00000473923 RP11-54C4.1-001 transcribed_processed_pseudogene Homo_sapiens 0 348
ENST00000487304 RPLP1-003 retained_intron Homo_sapiens 0 265
ENST00000488122 RPLP1-004 retained_intron Homo_sapiens 0 351
ENST00000488511 RP11-7F17.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000518134 RP11-54C4.1-002 processed_transcript Homo_sapiens 0 348
ENST00000560274 RPLP1-006 protein_coding Homo_sapiens 2e-28 128

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