C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171643 Cpne6-007 ENSMUSG00000022212 10090 + 14:55511985-55517429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000171643
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000171643 0.076±0.00 0.148±0.06 0.597±0.19 0.021±0.01 0.074±0.05 0.063±0.03 0.058±0.01 0.021±0.01 0.026±0.01 0.089±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031H CIL_00031H_0002 CGP 14:55491093-55517431
CIL_0003F9 CIL_0003F9_0002 CGP 14:55510445-55524981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IDA phosphatidylserine binding
GO:0008150 ND biological_process
GO:0016020 IDA membrane
GO:0030424 IDA axon
GO:0030425 IDA dendrite

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397016 CPNE6-003 protein_coding Homo_sapiens 0 2196
ENST00000460657 CPNE6-002 retained_intron Homo_sapiens 0 614
ENST00000537691 CPNE6-201 protein_coding Homo_sapiens 0 2196
ENST00000557829 CPNE6-006 retained_intron Homo_sapiens 0 427
ENST00000557889 CPNE6-017 protein_coding Homo_sapiens 0 198
ENST00000558450 CPNE6-014 protein_coding Homo_sapiens 0 527
ENST00000558541 CPNE6-018 protein_coding Homo_sapiens 0 876
ENST00000558795 CPNE6-005 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000558859 CPNE6-011 protein_coding Homo_sapiens 0 353
ENST00000558995 CPNE6-004 retained_intron Homo_sapiens 0 1633
ENST00000559197 CPNE6-019 protein_coding Homo_sapiens 0 534
ENST00000559207 CPNE6-013 protein_coding Homo_sapiens 0 699
ENST00000559778 CPNE6-016 protein_coding Homo_sapiens 0 399
ENST00000560092 CPNE6-008 processed_transcript Homo_sapiens 0 353
ENST00000560356 CPNE6-015 protein_coding Homo_sapiens 0 566
ENST00000560761 CPNE6-010 protein_coding Homo_sapiens 0 597
ENST00000560828 CPNE6-009 protein_coding Homo_sapiens 0 566
ENST00000560845 CPNE6-007 retained_intron Homo_sapiens 0 435
ENST00000560884 CPNE6-012 protein_coding Homo_sapiens 0 566

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