C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165240 Wnt11-004 ENSMUSG00000015957 10090 + 7:98838898-98853571 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000165240
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000165240 2.425±0.11 0.587±0.23 1.611±0.13 0.505±0.15 3.880±1.71 0.925±0.27 1.004±0.45 0.811±0.29 0.165±0.13 3.458±1.18 11.314±5.21 0.716±0.39 0.214±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000927 CIL_000927_0002 VISTA 7:98656508-99258633
CIL_0001HX CIL_0001HX_0002 CGP 7:98835112-99141144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IGI osteoblast differentiation
GO:0001822 IDA kidney development
GO:0003151 IMP outflow tract morphogenesis
GO:0005102 TAS receptor binding
GO:0005109 IBA frizzled binding
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0005737 IDA cytoplasm
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0009887 TAS organ morphogenesis
GO:0030182 IBA neuron differentiation
GO:0030282 IGI bone mineralization
GO:0031012 IDA extracellular matrix
GO:0032915 IMP positive regulation of transforming growth factor beta2 production
GO:0035567 IMP non-canonical Wnt signaling pathway
GO:0043065 IMP positive regulation of apoptotic process
GO:0045165 IBA cell fate commitment
GO:0048844 IMP artery morphogenesis
GO:0060021 IMP palate development
GO:0060070 IDA canonical Wnt signaling pathway
GO:0060412 IMP ventricular septum morphogenesis
GO:0070830 IMP tight junction assembly
GO:0072201 IMP negative regulation of mesenchymal cell proliferation
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:0090272 IMP negative regulation of fibroblast growth factor production

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322563 WNT11-001 protein_coding Homo_sapiens 0 721
ENST00000621122 WNT11-201 protein_coding Homo_sapiens 0 534

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