C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 4, subfamily f, polypeptide 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165061 Cyp4f40-201 ENSMUSG00000090700 10090 + 17:32659410-32676687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000165061
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000165061 0.030±0.01 0.128±0.03 0.031±0.00 28.408±3.88 0.026±0.00 0.027±0.00 0.051±0.03 0.099±0.07 0.119±0.06 0.032±0.01 0.155±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000011989 CYP4F2-201 protein_coding Homo_sapiens 0 1129
ENST00000221307 CYP4F3-001 protein_coding Homo_sapiens 0 1168
ENST00000221700 CYP4F2-001 protein_coding Homo_sapiens 0 1240
ENST00000248041 CYP4F11-004 protein_coding Homo_sapiens 0 1109
ENST00000324632 CYP4F12-006 protein_coding Homo_sapiens 0 1059
ENST00000326742 CYP4F11-002 protein_coding Homo_sapiens 0 848
ENST00000392846 CYP4F2-002 retained_intron Homo_sapiens 0 1085
ENST00000402119 CYP4F11-001 protein_coding Homo_sapiens 0 1109
ENST00000517734 CYP4F12-004 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000518629 CYP4F12-005 retained_intron Homo_sapiens 0 756
ENST00000546608 CYP4F12-008 retained_intron Homo_sapiens 0 401
ENST00000550308 CYP4F12-001 protein_coding Homo_sapiens 0 1059
ENST00000550627 CYP4F12-007 retained_intron Homo_sapiens 0 660
ENST00000585846 CYP4F3-005 protein_coding Homo_sapiens 0 1269
ENST00000586049 CYP4F24P-001 unprocessed_pseudogene Homo_sapiens 0 590
ENST00000586182 CYP4F3-004 protein_coding Homo_sapiens 0 1269
ENST00000587671 CYP4F2-004 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000589654 CYP4F2-007 protein_coding Homo_sapiens 7e-17 92
ENST00000589847 CYP4F9P-001 unprocessed_pseudogene Homo_sapiens 0 870
ENST00000591058 CYP4F3-002 protein_coding Homo_sapiens 0 1269
ENST00000591841 CYP4F11-003 protein_coding Homo_sapiens 0 717
ENST00000592279 CYP4F3-003 retained_intron Homo_sapiens 0 1120
ENST00000592424 CYP4F3-007 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000592710 CYP4F2-006 retained_intron Homo_sapiens 0 283
ENST00000593402 CYP4F23P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 773
ENST00000620614 CYP4F11-201 protein_coding Homo_sapiens 0 848
ENST00000620621 CYP4F3-201 protein_coding Homo_sapiens 0 1273

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