C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of zeste 12 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163272 Suz12-201 ENSMUSG00000017548 10090 + 11:79993106-80034122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163272
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163272 1.593±0.66 1.639±0.15 5.379±2.13 0.928±0.25 1.016±0.63 2.756±0.89 3.406±1.35 2.757±0.00 0.506±0.07 5.781±5.86 11.682±10.15 1.822±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0002 CGP 11:79932321-80034123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001739 IDA sex chromatin
GO:0003682 IDA chromatin binding
GO:0003723 IPI RNA binding
GO:0005634 IDA nucleus
GO:0008284 IMP positive regulation of cell proliferation
GO:0016571 IMP histone methylation
GO:0016574 IMP histone ubiquitination
GO:0043565 IDA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322652 SUZ12-001 protein_coding Homo_sapiens 0 2560
ENST00000497969 SUZ12P1-002 processed_transcript Homo_sapiens 0 488
ENST00000578070 SUZ12P1-005 processed_transcript Homo_sapiens 0 237
ENST00000578106 SUZ12-004 retained_intron Homo_sapiens 0 1219
ENST00000578195 SUZ12P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 857
ENST00000579526 SUZ12P1-004 processed_transcript Homo_sapiens 0 263
ENST00000580398 SUZ12-002 protein_coding Homo_sapiens 0 3443
ENST00000582329 SUZ12P1-006 processed_transcript Homo_sapiens 0 621
ENST00000582557 SUZ12P1-003 processed_transcript Homo_sapiens 0 686

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