C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16558
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163015 Gm16558-001 ENSMUSG00000089908 10090 + 18:25391801-25392332 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000163015
Transcript ID Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000163015 0.052±0.03 0.135±0.06 0.328±0.00 0.088±0.00 0.115±0.00 0.044±0.01 0.126±0.05 0.058±0.03 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E2 CIL_0008E2_0002 VISTA 18:24940595-25541640
CIL_00092R CIL_00092R_0002 VISTA 18:25077370-25678646
CIL_0002FL CIL_0002FL_0003 CGP 18:25127223-25467321
CIL_0002FC CIL_0002FC_0003 CGP 18:25168999-25753983
CIL_0007MG CIL_0007MG_0002 UCNEbase 18:25240836-25478294
CIL_0008E3 CIL_0008E3_0002 VISTA 18:25377414-25978414

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000418154 RP4-597J3.1-001 processed_pseudogene Homo_sapiens 0.00000006 62
ENST00000432746 RPL19P12-001 processed_pseudogene Homo_sapiens 0.0000000000006 79

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