C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155939 Psmf1-002 ENSMUSG00000032869 10090 - 2:151716062-151741293 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000155939
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000155939 2.367±0.35 3.915±0.03 1.902±0.00 3.153±0.76 3.583±0.00 1.386±0.30 3.143±1.07 3.767±0.99 4.015±0.50 1.170±0.34 2.960±1.03 1.846±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246015 PSMF1-003 protein_coding Homo_sapiens 0 468
ENST00000333082 PSMF1-201 protein_coding Homo_sapiens 0 760
ENST00000335877 PSMF1-006 protein_coding Homo_sapiens 0 760
ENST00000381898 PSMF1-010 protein_coding Homo_sapiens 0 309
ENST00000435720 PSMF1-004 protein_coding Homo_sapiens 0 274
ENST00000479715 PSMF1-001 processed_transcript Homo_sapiens 0 353
ENST00000484891 PSMF1-005 processed_transcript Homo_sapiens 0 760
ENST00000618417 MKL1-204 protein_coding Homo_sapiens 0.000009 57

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