C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calreticulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154774 Calr-004 ENSMUSG00000003814 10090 - 8:84842596-84844916 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000154774
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000154774 304.766±0.00 573.345±553.64 1574.708±1297.45 1709.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316448 CALR-001 protein_coding Homo_sapiens 0 928
ENST00000588454 CALR-008 protein_coding Homo_sapiens 0 592
ENST00000590325 CALR-004 retained_intron Homo_sapiens 0 279

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