C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 3, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149734 Tpm3-014 ENSMUSG00000027940 10090 + 3:90088061-90090042 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryPlacentaTestisENSMUST00000149734
Transcript ID Adrenal Breast Ovary Placenta Testis
ENSMUST00000149734 25.251±0.00 44.411±0.00 45.083±24.29 218.010±63.40 15.361±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009054 tpm4a-201 protein_coding Danio_rerio 2e-21 106
ENSDART00000123125 tpm4a-203 protein_coding Danio_rerio 2e-21 106
ENSDART00000036075 tpm4a-202 protein_coding Danio_rerio 2e-21 106
ENSDART00000138978 tpm4a-002 protein_coding Danio_rerio 2e-21 106
ENSDART00000142717 tpm4a-001 protein_coding Danio_rerio 2e-21 106
ENST00000271850 TPM3-015 protein_coding Homo_sapiens 0 279
ENST00000302206 TPM3-011 protein_coding Homo_sapiens 3e-36 156
ENST00000312970 TPM3-022 processed_transcript Homo_sapiens 0 279
ENST00000323144 TPM3-010 protein_coding Homo_sapiens 5e-36 156
ENST00000328159 TPM3-006 protein_coding Homo_sapiens 0 279
ENST00000330188 TPM3-009 protein_coding Homo_sapiens 1e-35 156
ENST00000330554 TPM3P8-001 processed_pseudogene Homo_sapiens 0 263
ENST00000338274 TPM3P7-001 processed_pseudogene Homo_sapiens 0 233
ENST00000341372 TPM3-005 protein_coding Homo_sapiens 0 279
ENST00000341485 TPM3-003 protein_coding Homo_sapiens 0 279
ENST00000368530 TPM3-001 protein_coding Homo_sapiens 7e-36 156
ENST00000368531 TPM3-026 protein_coding Homo_sapiens 0 279
ENST00000368533 TPM3-004 protein_coding Homo_sapiens 0 279
ENST00000368545 TPM3-014 retained_intron Homo_sapiens 0 368
ENST00000391998 TPM3P6-001 processed_pseudogene Homo_sapiens 0 239
ENST00000413233 TPM3P1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000424846 TPM3P9-002 processed_transcript Homo_sapiens 0 250
ENST00000425942 TPM3P4-001 processed_pseudogene Homo_sapiens 0 220
ENST00000469717 TPM3-008 processed_transcript Homo_sapiens 0 220
ENST00000492121 TPM3P9-001 transcribed_processed_pseudogene Homo_sapiens 0 250
ENST00000504663 TPM3-025 retained_intron Homo_sapiens 2e-28 130
ENST00000505010 TPM3-023 retained_intron Homo_sapiens 4e-29 132
ENST00000509409 TPM3-016 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000509601 TPM3-020 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000513769 TPM3-024 retained_intron Homo_sapiens 1e-34 150
ENST00000561804 RP11-618N24.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000567701 RP11-297L17.6-001 processed_pseudogene Homo_sapiens 0 263
ENST00000599541 AC243960.2-201 protein_coding Homo_sapiens 0 252
ENST00000600996 AC005795.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000611659 TPM3-201 protein_coding Homo_sapiens 9e-28 130

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