C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COX assembly mitochondrial protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148235 Cmc2-001 ENSMUSG00000014633 10090 - 8:116888685-116921455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148235 5.833±0.93 5.927±1.10 3.286±0.33 2.459±1.00 3.603±0.58 3.660±0.48 10.600±1.54 6.127±0.40 6.098±4.33 3.512±0.47 5.742±0.71 2.314±0.72 3.739±2.49 3.461±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PZ CIL_0001PZ_0002 CGP 8:116568724-116921455
CIL_0004YC CIL_0004YC_0003 CGP 8:116888685-116941503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 ISS mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219400 CMC2-001 protein_coding Homo_sapiens 0 211
ENST00000561614 CMC2-006 nonsense_mediated_decay Homo_sapiens 5e-29 132
ENST00000562713 CMC2-022 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000562828 CMC2-010 processed_transcript Homo_sapiens 1.99993e-41 172
ENST00000563779 CMC2-003 retained_intron Homo_sapiens 0 211
ENST00000564249 CMC2-017 protein_coding Homo_sapiens 0 211
ENST00000565613 CMC2-020 nonsense_mediated_decay Homo_sapiens 3.00004e-41 172
ENST00000565650 CMC2-009 protein_coding Homo_sapiens 0 211
ENST00000565914 CMC2-007 protein_coding Homo_sapiens 0 211
ENST00000565925 CMC2-011 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000569666 CMC2-023 retained_intron Homo_sapiens 3.00004e-41 172

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