C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147163 Jmjd4-003 ENSMUSG00000036819 10090 + 11:59450045-59458567 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000147163
Transcript ID Adrenal Bladder Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147163 4.675±0.35 1.925±0.00 2.687±0.07 1.749±0.20 1.659±0.07 2.552±0.00 1.482±0.16 4.065±0.66 1.716±0.00 1.473±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C4 CIL_0000C4_0003 CGP 11:59407134-59458567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366758 JMJD4-001 protein_coding Homo_sapiens 0 398
ENST00000485807 JMJD4-003 retained_intron Homo_sapiens 0 305
ENST00000615711 JMJD4-201 protein_coding Homo_sapiens 0 398
ENST00000620518 JMJD4-006 protein_coding Homo_sapiens 0 398

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