C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin II complex, subunit H2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145259 Ncaph2-003 ENSMUSG00000008690 10090 + 15:89355763-89372826 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverOvaryPlacentaENSMUST00000145259
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Ovary Placenta
ENSMUST00000145259 7.214±0.61 7.855±0.00 6.891±0.00 5.162±0.76 10.247±0.00 5.948±0.68 9.965±3.23 7.932±0.00 12.289±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026C CIL_00026C_0002 CGP 15:89351004-89372826
CIL_0000V1 CIL_0000V1_0003 CGP 15:89355719-89373818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0033077 IMP T cell differentiation in thymus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252785 SCO2-002 protein_coding Homo_sapiens 0 604
ENST00000299821 NCAPH2-009 protein_coding Homo_sapiens 0 1264
ENST00000395693 SCO2-001 protein_coding Homo_sapiens 0 604
ENST00000395698 NCAPH2-003 protein_coding Homo_sapiens 0 532
ENST00000395701 NCAPH2-006 protein_coding Homo_sapiens 0 1094
ENST00000418794 NCAPH2-004 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000420993 NCAPH2-001 protein_coding Homo_sapiens 0 1277
ENST00000518394 NCAPH2-013 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000523045 NCAPH2-012 protein_coding Homo_sapiens 0 329
ENST00000535425 SCO2-201 protein_coding Homo_sapiens 0 604
ENST00000543927 SCO2-202 protein_coding Homo_sapiens 0 604

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