C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143879 Spata6-005 ENSMUSG00000034401 10090 + 4:111777558-111829134 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000143879
Transcript ID Adipose Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000143879 2.699±0.00 1.872±0.00 1.072±0.00 0.261±0.25 0.425±0.04 3.982±1.63 2.219±1.18 67.635±19.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371841 SPATA6-005 protein_coding Homo_sapiens 0 778
ENST00000371843 SPATA6-002 protein_coding Homo_sapiens 0 778
ENST00000371847 SPATA6-001 protein_coding Homo_sapiens 0 1299
ENST00000396199 SPATA6-201 protein_coding Homo_sapiens 0 1299
ENST00000463938 SPATA6-003 processed_transcript Homo_sapiens 0 392
ENST00000490850 SPATA6-004 processed_transcript Homo_sapiens 0 941
ENST00000603831 SPATA6-010 nonsense_mediated_decay Homo_sapiens 0 802

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