C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease, RNase K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141880 Rnasek-003 ENSMUSG00000093989 10090 - 11:70238127-70239058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000141880
Transcript ID Brain Ovary Placenta
ENSMUST00000141880 34.161±0.00 70.088±9.45 103.116±7.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SP CIL_0006SP_0003 CGP 11:70235206-70239830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004521 IEA endoribonuclease activity
GO:0009303 IEA rRNA transcription
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402093 RNASEK-201 protein_coding Homo_sapiens 0 353
ENST00000546395 RNASEK-003 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000547302 RNASEK-C17orf49-004 protein_coding Homo_sapiens 0 213
ENST00000547863 RNASEK-C17orf49-002 retained_intron Homo_sapiens 0 351
ENST00000548577 RNASEK-001 protein_coding Homo_sapiens 0 353
ENST00000549393 RNASEK-004 protein_coding Homo_sapiens 0 355
ENST00000549775 RNASEK-C17orf49-001 retained_intron Homo_sapiens 0 353
ENST00000552039 RNASEK-007 protein_coding Homo_sapiens 0 351
ENST00000552176 RNASEK-011 retained_intron Homo_sapiens 0 363
ENST00000552321 RNASEK-005 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000552842 RNASEK-006 protein_coding Homo_sapiens 0 353
ENST00000570898 RNASEK-008 protein_coding Homo_sapiens 0 353
ENST00000593646 RNASEK-012 protein_coding Homo_sapiens 0 353
ENST00000607564 RNASEK-C17orf49-005 retained_intron Homo_sapiens 0 363

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