C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141531 Trim47-003 ENSMUSG00000020773 10090 - 11:116105752-116108119 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleOvaryPlacentaTestisENSMUST00000141531
Transcript ID Heart Kidney Muscle Ovary Placenta Testis
ENSMUST00000141531 2.414±0.00 4.194±0.89 1.778±0.40 7.736±2.85 1.346±0.00 0.787±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078U CIL_00078U_0002 CGP 11:116078573-116127210
CIL_00078V CIL_00078V_0002 CGP 11:116105752-116131128

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254816 TRIM47-001 protein_coding Homo_sapiens 0 1042
ENST00000585333 TRIM47-007 protein_coding Homo_sapiens 1e-29 134
ENST00000587339 TRIM47-002 protein_coding Homo_sapiens 0 1042
ENST00000592942 TRIM47-006 retained_intron Homo_sapiens 0 664

Loading