C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140996 Brap-002 ENSMUSG00000029458 10090 + 5:121660574-121687243 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000140996
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000140996 2.115±0.00 8.330±1.58 11.645±1.06 8.498±3.30 4.865±2.20 5.232±1.23 5.301±2.77 14.391±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327551 BRAP-002 protein_coding Homo_sapiens 0 1515
ENST00000419234 BRAP-001 protein_coding Homo_sapiens 0 1515
ENST00000547043 BRAP-003 retained_intron Homo_sapiens 0 1147

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