C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140882 Trim3-004 ENSMUSG00000036989 10090 - 7:105619106-105633571 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryENSMUST00000140882
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000140882 14.659±0.00 12.200±1.45 10.613±0.65 9.777±1.42 10.524±0.00 36.601±0.00 12.630±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A5 CIL_0004A5_0002 CGP 7:105591613-105633571
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345851 TRIM3-001 protein_coding Homo_sapiens 0 664
ENST00000359518 TRIM3-201 protein_coding Homo_sapiens 0 643
ENST00000525074 TRIM3-002 protein_coding Homo_sapiens 0 643
ENST00000528227 TRIM3-006 protein_coding Homo_sapiens 0 643
ENST00000528932 TRIM3-007 processed_transcript Homo_sapiens 0 449
ENST00000529529 TRIM3-005 protein_coding Homo_sapiens 0 420
ENST00000536344 TRIM3-202 protein_coding Homo_sapiens 0 449

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