C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135010 Farp1-002 ENSMUSG00000025555 10090 + 14:121035200-121235089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000135010
Transcript ID Placenta
ENSMUST00000135010 14.342±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FZ CIL_0004FZ_0003 CGP 14:120911194-121283744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319562 FARP1-001 protein_coding Homo_sapiens 0 701
ENST00000595437 FARP1-011 protein_coding Homo_sapiens 0 701
ENST00000595817 FARP1-040 processed_transcript Homo_sapiens 0 453
ENST00000596467 FARP1-034 retained_intron Homo_sapiens 0 486
ENST00000596613 FARP1-027 processed_transcript Homo_sapiens 0 353
ENST00000598389 FARP1-039 protein_coding Homo_sapiens 0 675
ENST00000599040 FARP1-016 protein_coding Homo_sapiens 0 488
ENST00000600032 FARP1-028 processed_transcript Homo_sapiens 0 453
ENST00000601009 FARP1-038 protein_coding Homo_sapiens 0 272
ENST00000601853 FARP1-032 processed_transcript Homo_sapiens 0 353
ENST00000602263 FARP1-041 processed_transcript Homo_sapiens 0 486

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