C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5730455P16 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134274 5730455P16Rik-003 ENSMUSG00000057181 10090 - 11:80370418-80378034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungOvaryPlacentaTestisENSMUST00000134274
Transcript ID Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENSMUST00000134274 1.015±0.32 22.715±0.00 2.127±0.50 1.021±0.31 1.977±0.00 2.458±2.69 6.466±1.72 2.385±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VP CIL_0000VP_0002 CGP 11:80300912-80378034
CIL_0005IX CIL_0005IX_0002 CGP 11:80360492-80405733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225805 C17orf75-201 protein_coding Homo_sapiens 0 523
ENST00000577809 C17orf75-001 protein_coding Homo_sapiens 0 534
ENST00000580485 C17orf75-005 retained_intron Homo_sapiens 0 433
ENST00000580558 C17orf75-007 protein_coding Homo_sapiens 0 560
ENST00000581747 C17orf75-009 protein_coding Homo_sapiens 0 534
ENST00000582073 C17orf75-003 retained_intron Homo_sapiens 0 433
ENST00000583221 C17orf75-004 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000583334 C17orf75-008 protein_coding Homo_sapiens 0 455
ENST00000583774 C17orf75-002 protein_coding Homo_sapiens 0 534

Loading