C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133149 Cuedc1-003 ENSMUSG00000018378 10090 + 11:88099290-88185365 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133149
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133149 6.780±1.05 11.523±0.17 6.584±1.65 5.537±0.59 4.437±0.20 2.255±0.44 0.326±0.08 5.863±1.14 10.439±0.00 7.545±2.31 2.380±1.54 0.343±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DL CIL_0009DL_0002 VISTA 11:87880548-88481652
CIL_0009DM CIL_0009DM_0002 VISTA 11:87974079-88576075
CIL_0007PL CIL_0007PL_0002 UCNEbase 11:88049942-88585488
CIL_00039R CIL_00039R_0002 CGP 11:88068279-88194140

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360238 CUEDC1-002 protein_coding Homo_sapiens 0 835
ENST00000407144 CUEDC1-013 protein_coding Homo_sapiens 0 835
ENST00000577589 CUEDC1-003 protein_coding Homo_sapiens 0 521
ENST00000577830 CUEDC1-001 protein_coding Homo_sapiens 0 835

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