C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily V, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133019 Trpv4-004 ENSMUSG00000014158 10090 - 5:114622157-114636261 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000133019
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133019 0.969±0.10 0.414±0.11 4.253±0.37 0.173±0.01 1.010±0.16 0.377±0.20 0.103±0.06 0.621±0.14 0.111±0.00 0.811±0.38 0.115±0.03 0.145±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JO CIL_0001JO_0003 CGP 5:114568016-114658421
CIL_00062E CIL_00062E_0003 CGP 5:114622152-114690984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261740 TRPV4-001 protein_coding Homo_sapiens 0 2372
ENST00000310522 TRPV1-006 protein_coding Homo_sapiens 0 206
ENST00000399756 TRPV1-003 protein_coding Homo_sapiens 0 206
ENST00000399759 TRPV1-002 protein_coding Homo_sapiens 0 206
ENST00000418703 TRPV4-006 protein_coding Homo_sapiens 0 2372
ENST00000425167 TRPV1-005 protein_coding Homo_sapiens 0 206
ENST00000536838 TRPV4-005 protein_coding Homo_sapiens 0 2368
ENST00000537083 TRPV4-003 protein_coding Homo_sapiens 0 1594
ENST00000538125 TRPV4-007 nonsense_mediated_decay Homo_sapiens 0 1208
ENST00000541794 TRPV4-004 protein_coding Homo_sapiens 0 2194
ENST00000544971 TRPV4-002 protein_coding Homo_sapiens 0 1594
ENST00000571088 TRPV1-001 protein_coding Homo_sapiens 0 206
ENST00000572705 TRPV1-002 protein_coding Homo_sapiens 0 206
ENST00000574085 TRPV1-007 retained_intron Homo_sapiens 0 206
ENST00000576351 TRPV1-004 protein_coding Homo_sapiens 0 206

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