C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early growth response 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127820 Egr2-003 ENSMUSG00000037868 10090 + 10:67538683-67542188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127820
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127820 0.193±0.00 0.062±0.04 2.193±0.00 0.111±0.00 0.121±0.00 0.157±0.00 0.061±0.05 0.441±0.00 0.176±0.00 1.556±1.68 0.025±0.01 0.063±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0007622 IDA rhythmic behavior
GO:0008045 IGI motor neuron axon guidance
GO:0014037 IMP Schwann cell differentiation
GO:0021569 IGI rhombomere 3 development
GO:0021612 IGI facial nerve structural organization
GO:0021660 IMP rhombomere 3 formation
GO:0021666 IMP rhombomere 5 formation
GO:0030278 IMP regulation of ossification
GO:0035284 IMP brain segmentation
GO:0035914 IMP skeletal muscle cell differentiation
GO:0042552 IMP myelination
GO:0043066 IBA negative regulation of apoptotic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048168 IBA regulation of neuronal synaptic plasticity
GO:0071310 IDA cellular response to organic substance
GO:0071320 IBA cellular response to cAMP
GO:0071371 IBA cellular response to gonadotropin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242480 EGR2-001 protein_coding Homo_sapiens 0 1832
ENST00000317216 EGR3-001 protein_coding Homo_sapiens 0 213
ENST00000411732 EGR2-201 protein_coding Homo_sapiens 0 1820
ENST00000439032 EGR2-202 protein_coding Homo_sapiens 0 1820
ENST00000493899 EGR2-002 processed_transcript Homo_sapiens 0.0000000004 69
ENST00000519492 EGR3-002 protein_coding Homo_sapiens 0 213
ENST00000522910 EGR3-003 protein_coding Homo_sapiens 0 213
ENST00000524088 EGR3-004 processed_transcript Homo_sapiens 0 213

Loading