C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125551 Csmd1-002 ENSMUSG00000060924 10090 - 8:15892545-15984812 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000125551
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000125551 0.134±0.00 0.087±0.00 1.582±0.00 0.108±0.00 0.050±0.01 0.128±0.06 0.009±0.01 0.031±0.01 0.813±0.23 0.023±0.03 0.835±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0003 CGP 8:15057653-17535586
CIL_0000LC CIL_0000LC_0002 CGP 8:15892537-18803189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000059170 CSMD1-201 protein_coding Danio_rerio 0 418
ENSDART00000097148 CSMD1-202 protein_coding Danio_rerio 0 244
ENST00000335551 CSMD1-006 protein_coding Homo_sapiens 0 3155
ENST00000400186 CSMD1-004 protein_coding Homo_sapiens 0 900
ENST00000520002 CSMD1-001 protein_coding Homo_sapiens 0 2165
ENST00000537824 CSMD1-201 protein_coding Homo_sapiens 0 2165
ENST00000602557 CSMD1-017 protein_coding Homo_sapiens 0 2165
ENST00000602723 CSMD1-018 protein_coding Homo_sapiens 0 900

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