C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3D, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122211 Rab3d-002 ENSMUSG00000019066 10090 - 9:21907510-21918139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000122211
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000122211 0.212±0.00 0.151±0.00 2.215±1.01 0.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016R CIL_00016R_0003 CGP 9:21907491-21927535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006887 IEA exocytosis
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0017157 IDA regulation of exocytosis
GO:0018125 IDA peptidyl-cysteine methylation
GO:0030133 IEA transport vesicle
GO:0031489 IEA myosin V binding
GO:0042588 IDA zymogen granule
GO:0051020 IEA GTPase binding
GO:0070062 IEA extracellular vesicular exosome
GO:1903307 IEA positive regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222120 RAB3D-001 protein_coding Homo_sapiens 0 765
ENST00000589655 RAB3D-002 protein_coding Homo_sapiens 0 765

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