C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121266 Celf6-002 ENSMUSG00000032297 10090 + 9:59589288-59607291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLungOvaryPlacentaTestisENSMUST00000121266
Transcript ID Adipose Breast Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000121266 0.031±0.02 0.064±0.00 0.023±0.00 0.090±0.02 0.052±0.04 0.102±0.08 0.008±0.01 1.661±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001505 IMP regulation of neurotransmitter levels
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287202 CELF6-001 protein_coding Homo_sapiens 0 1013
ENST00000379915 RP11-106M3.2-001 nonsense_mediated_decay Homo_sapiens 0 1219
ENST00000395258 CELF6-201 protein_coding Homo_sapiens 0 800
ENST00000437872 CELF6-008 nonsense_mediated_decay Homo_sapiens 0 1013
ENST00000543764 CELF6-003 protein_coding Homo_sapiens 0 1803
ENST00000567083 CELF6-002 protein_coding Homo_sapiens 0 1175
ENST00000569311 CELF6-004 processed_transcript Homo_sapiens 0 294
ENST00000569547 CELF6-001 nonsense_mediated_decay Homo_sapiens 0 771

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