C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6565
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121217 Gm6565-001 ENSMUSG00000079224 10090 + 6:100604683-100605120 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121217
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121217 0.202±0.05 0.130±0.11 0.471±0.45 0.206±0.06 0.214±0.08 0.620±0.43 0.180±0.00 0.313±0.10 0.565±0.00 0.052±0.00 0.472±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T9 CIL_0001T9_0003 CGP 6:100228566-100671157
CIL_00059P CIL_00059P_0003 CGP 6:100573081-100805081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340309 UBE2V1-003 protein_coding Homo_sapiens 0 390
ENST00000341698 TMEM189-UBE2V1-001 protein_coding Homo_sapiens 0 398
ENST00000371674 UBE2V1-004 protein_coding Homo_sapiens 0 388
ENST00000371677 UBE2V1-002 protein_coding Homo_sapiens 0 390
ENST00000396059 UBE2V1-010 processed_transcript Homo_sapiens 0 226
ENST00000397758 UBE2V1P2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000415862 UBE2V1-001 protein_coding Homo_sapiens 0 226
ENST00000420027 UBE2V1-201 protein_coding Homo_sapiens 0 222
ENST00000432266 UBE2V1-016 processed_transcript Homo_sapiens 0 285
ENST00000433562 UBE2V2P3-001 processed_pseudogene Homo_sapiens 0 442
ENST00000467839 UBE2V1-020 retained_intron Homo_sapiens 0 292
ENST00000472923 UBE2V1-015 processed_transcript Homo_sapiens 0 291
ENST00000483534 UBE2V1-007 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000486653 UBE2V1-017 processed_transcript Homo_sapiens 0 377
ENST00000490555 UBE2V1-012 retained_intron Homo_sapiens 8.99998e-41 171
ENST00000492371 UBE2V1-013 processed_transcript Homo_sapiens 0 226
ENST00000493090 UBE2V1-019 retained_intron Homo_sapiens 2e-28 130
ENST00000517630 UBE2V2-006 protein_coding Homo_sapiens 0 664
ENST00000518360 UBE2V2-008 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000520595 UBE2V2-010 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000520809 UBE2V2-002 protein_coding Homo_sapiens 0 667
ENST00000521346 UBE2V2-007 protein_coding Homo_sapiens 0 667
ENST00000521628 UBE2V2-003 retained_intron Homo_sapiens 0 412
ENST00000523111 UBE2V2-001 protein_coding Homo_sapiens 0 693
ENST00000523432 UBE2V2-009 protein_coding Homo_sapiens 0 412
ENST00000557021 UBE2V1-202 protein_coding Homo_sapiens 0 387
ENST00000617119 UBE2V1-203 protein_coding Homo_sapiens 0 387
ENST00000625172 UBE2V1-204 protein_coding Homo_sapiens 0 390

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