C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7308
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121087 Gm7308-001 ENSMUSG00000081113 10090 - 6:127282063-127282509 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000121087
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000121087 0.036±0.01 1.253±1.24 0.019±0.00 0.144±0.01 0.248±0.17 0.226±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272298 CALM2-001 protein_coding Homo_sapiens 0 606
ENST00000400429 CALM2P3-001 processed_pseudogene Homo_sapiens 0 527
ENST00000409563 CALM2-007 protein_coding Homo_sapiens 0 555
ENST00000428512 CALM2P2-001 processed_pseudogene Homo_sapiens 0 512
ENST00000430810 CALM2P4-001 processed_pseudogene Homo_sapiens 0 483
ENST00000432899 CALM2-002 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000456319 CALM2-006 protein_coding Homo_sapiens 0 603
ENST00000460218 CALM2-003 retained_intron Homo_sapiens 0 603
ENST00000482532 CALM2-004 retained_intron Homo_sapiens 0 555
ENST00000484408 CALM2-009 processed_transcript Homo_sapiens 0 575
ENST00000489742 CALM2-008 processed_transcript Homo_sapiens 0 396
ENST00000585658 CALM2P1-001 processed_pseudogene Homo_sapiens 0 427

Loading