C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12657
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119560 Gm12657-001 ENSMUSG00000063314 10090 + 4:94599385-94599795 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000119560
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000119560 0.269±0.12 0.149±0.01 4.218±3.87 0.273±0.08 0.246±0.00 0.118±0.00 5.114±10.05 0.349±0.15 0.556±0.05 0.209±0.02 0.127±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074I CIL_00074I_0002 CGP 4:94567514-94693229

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 627
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 584
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 643
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 440
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 643
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 643
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 643
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 592
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 540
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 472
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 562
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 540
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 274
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000547971 RP11-98E6.1-001 processed_pseudogene Homo_sapiens 0 246
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 470
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000604278 RP11-124D2.7-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 344
ENST00000604456 RP11-124D2.7-002 processed_transcript Homo_sapiens 0 375

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