C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13039
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118638 Gm13039-001 ENSMUSG00000083826 10090 + 4:143166603-143167396 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118638
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118638 0.198±0.05 0.206±0.00 0.322±0.09 0.224±0.06 0.185±0.00 0.119±0.08 0.252±0.26 0.132±0.00 0.078±0.00 0.209±0.07 0.236±0.03 0.154±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WT CIL_0003WT_0002 CGP 4:142102390-143212995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 595
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 560
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 695
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 695
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 440
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 712
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 706
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 695
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 701
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 569
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 706
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 695
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 701
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 652
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 335
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 828
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 549
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 749
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 647
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 438
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 828

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