C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118164 Celf6-003 ENSMUSG00000032297 10090 + 9:59589339-59606318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118164
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118164 0.471±0.07 0.046±0.00 4.235±2.39 0.698±0.14 0.049±0.00 0.040±0.02 0.016±0.01 0.026±0.00 0.084±0.03 0.041±0.00 3.898±1.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001505 IMP regulation of neurotransmitter levels
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005737 IDA cytoplasm
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287202 CELF6-001 protein_coding Homo_sapiens 0 793
ENST00000379915 RP11-106M3.2-001 nonsense_mediated_decay Homo_sapiens 0 1009
ENST00000395258 CELF6-201 protein_coding Homo_sapiens 0 793
ENST00000437872 CELF6-008 nonsense_mediated_decay Homo_sapiens 0 793
ENST00000543764 CELF6-003 protein_coding Homo_sapiens 0 1762
ENST00000567083 CELF6-002 protein_coding Homo_sapiens 0 1179
ENST00000569311 CELF6-004 processed_transcript Homo_sapiens 0 294
ENST00000569547 CELF6-001 nonsense_mediated_decay Homo_sapiens 0 773

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