C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118086 Rpl31-ps5-001 ENSMUSG00000082716 10090 + 5:20806090-20806464 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118086
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118086 0.214±0.00 0.069±0.00 0.237±0.03 0.352±0.10 0.162±0.00 0.324±0.00 0.044±0.02 0.235±0.00 0.600±0.11 0.023±0.00 0.352±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000862 CIL_000862_0002 VISTA 5:20650023-21250986

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 379
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 272
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 337
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 339
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 337
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 337
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 272
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 379
ENST00000414975 RP11-681L4.1-001 processed_pseudogene Homo_sapiens 2e-40 169
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 261
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 278
ENST00000449897 AC140076.1-001 processed_pseudogene Homo_sapiens 0 206
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 337
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 270
ENST00000471148 RP11-147K6.1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 193
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 270
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 270

Loading