C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117961 Rpl31-ps22-001 ENSMUSG00000081925 10090 + 15:84030339-84030675 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000117961
Transcript ID Testis
ENSMUST00000117961 0.501±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UU CIL_0004UU_0002 CGP 15:83779467-84065379
CIL_0004UV CIL_0004UV_0002 CGP 15:83866712-84105754
CIL_0008HG CIL_0008HG_0002 VISTA 15:83917537-84520713

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264065 DNAJC10-001 protein_coding Homo_sapiens 3e-25 124
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 322
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 204
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 315
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 318
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 318
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 318
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 318
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 313
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 320
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000422565 RPL31P63-001 processed_pseudogene Homo_sapiens 0 281
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 272
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 291
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 243
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 298
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 263
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 267
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000449770 RPL31P15-001 processed_pseudogene Homo_sapiens 4e-27 124
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 270
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 209
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 316
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 267
ENST00000465747 RP11-522B15.1-001 processed_pseudogene Homo_sapiens 4e-32 141
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 252
ENST00000490759 RPL31P49-001 processed_pseudogene Homo_sapiens 0 311
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 276
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 268
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 268

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