C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114544 Abi1-006 ENSMUSG00000058835 10090 - 2:22940369-23040185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungOvaryPlacentaENSMUST00000114544
Transcript ID Bladder Breast Colon Liver Lung Ovary Placenta
ENSMUST00000114544 7.397±0.00 7.123±2.64 11.533±1.66 9.568±3.82 8.630±0.46 6.620±0.50 9.071±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266
CIL_0000R7 CIL_0000R7_0002 CGP 2:22895522-23040241
CIL_0000QC CIL_0000QC_0002 CGP 2:22940073-23114510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0005515 IPI protein binding
GO:0005622 ISA intracellular
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0009987 IDA cellular process
GO:0018108 ISA peptidyl-tyrosine phosphorylation
GO:0030027 IDA lamellipodium
GO:0030054 IEA cell junction
GO:0030296 IDA protein tyrosine kinase activator activity
GO:0031252 IDA cell leading edge
GO:0035855 IMP megakaryocyte development
GO:0043005 IDA neuron projection
GO:0045211 IEA postsynaptic membrane
GO:0061098 IEA positive regulation of protein tyrosine kinase activity
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346832 ABI1-201 protein_coding Homo_sapiens 0 1079
ENST00000359188 ABI1-007 protein_coding Homo_sapiens 0 1138
ENST00000376137 ABI1-202 protein_coding Homo_sapiens 0 1162
ENST00000376138 ABI1-001 protein_coding Homo_sapiens 0 1162
ENST00000376139 ABI1-009 protein_coding Homo_sapiens 0 1203
ENST00000376140 ABI1-006 protein_coding Homo_sapiens 0 1055
ENST00000376142 ABI1-005 protein_coding Homo_sapiens 0 1138
ENST00000376160 ABI1-004 protein_coding Homo_sapiens 0 1206
ENST00000376166 ABI1-003 protein_coding Homo_sapiens 0 1214
ENST00000376170 ABI1-002 protein_coding Homo_sapiens 0 1103
ENST00000473481 ABI1-008 processed_transcript Homo_sapiens 0 483
ENST00000490841 ABI1-203 protein_coding Homo_sapiens 0 1483
ENST00000536334 ABI1-204 protein_coding Homo_sapiens 0 2237
ENST00000603375 RP11-132J14.3-001 unprocessed_pseudogene Homo_sapiens 0 747

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