C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collapsin response mediator protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114158 Crmp1-202 ENSMUSG00000029121 10090 + 5:37242080-37292131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000114158
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000114158 1.698±0.23 0.020±0.00 88.081±11.20 0.173±0.00 0.417±0.10 0.079±0.00 0.123±0.09 0.106±0.01 0.016±0.01 0.183±0.07 2.691±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146517 dpysl2b-001 protein_coding Danio_rerio 0 436
ENST00000324989 CRMP1-001 protein_coding Homo_sapiens 0 3046
ENST00000338492 DPYSL4-001 protein_coding Homo_sapiens 0 549
ENST00000368627 DPYSL4-004 protein_coding Homo_sapiens 0 298
ENST00000397890 CRMP1-003 protein_coding Homo_sapiens 0 2553
ENST00000506216 CRMP1-005 processed_transcript Homo_sapiens 0 1670
ENST00000511535 CRMP1-004 processed_transcript Homo_sapiens 0 2553
ENST00000512574 CRMP1-002 protein_coding Homo_sapiens 0 2366
ENST00000513911 CRMP1-006 processed_transcript Homo_sapiens 0 815

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