C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 4C, cAMP specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110095 Pde4c-001 ENSMUSG00000031842 10090 + 8:70724065-70751172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110095
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110095 0.382±0.13 0.066±0.01 0.575±0.10 0.782±0.35 1.508±0.12 27.216±3.72 4.765±3.31 0.563±0.17 0.578±0.29 0.561±0.40 0.610±0.85 0.172±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BA CIL_0006BA_0002 CGP 8:70723720-70758677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0046872 IEA metal ion binding
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104292 pde4cb-001 protein_coding Danio_rerio 0 436
ENSDART00000018934 pde4d-201 protein_coding Danio_rerio 3e-37 161
ENSDART00000139452 pde4d-001 protein_coding Danio_rerio 3e-37 161
ENST00000262805 PDE4C-004 protein_coding Homo_sapiens 0 1432
ENST00000293683 PDE4A-002 protein_coding Homo_sapiens 0 686
ENST00000344979 PDE4A-004 protein_coding Homo_sapiens 0 686
ENST00000355502 PDE4C-001 protein_coding Homo_sapiens 0 1432
ENST00000380702 PDE4A-001 protein_coding Homo_sapiens 0 686
ENST00000440014 PDE4A-003 protein_coding Homo_sapiens 0 686
ENST00000447275 PDE4C-005 protein_coding Homo_sapiens 0 1435
ENST00000539010 PDE4C-201 protein_coding Homo_sapiens 0 1282
ENST00000589073 PDE4A-006 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000590407 PDE4A-007 retained_intron Homo_sapiens 0 597
ENST00000592685 PDE4A-005 protein_coding Homo_sapiens 0 686
ENST00000594465 PDE4C-003 protein_coding Homo_sapiens 0 1432
ENST00000594617 PDE4C-002 protein_coding Homo_sapiens 0 1432
ENST00000597297 PDE4C-007 protein_coding Homo_sapiens 0 1179
ENST00000597360 PDE4C-006 retained_intron Homo_sapiens 0 1079
ENST00000598111 PDE4C-008 protein_coding Homo_sapiens 0 769
ENST00000599188 PDE4C-009 nonsense_mediated_decay Homo_sapiens 0 1282

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