C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110078 Kcnn1-201 ENSMUSG00000002908 10090 - 8:70842049-70857008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110078
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110078 1.560±0.36 0.185±0.00 2.091±1.19 2.727±1.73 2.908±0.94 0.972±0.60 0.978±0.73 0.774±0.00 2.285±1.27 1.005±0.56 0.136±0.07 0.297±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IDA calmodulin binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016286 IBA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103211 kcnn3-201 protein_coding Danio_rerio 0 586
ENSDART00000131627 kcnn3-001 protein_coding Danio_rerio 0 586
ENST00000222249 KCNN1-001 protein_coding Homo_sapiens 0 1476
ENST00000615435 KCNN1-201 protein_coding Homo_sapiens 0 1450

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