C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094320 Ccdc62-001 ENSMUSG00000061882 10090 + 5:123930689-123968909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000094320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000094320 1.435±0.11 0.955±0.21 3.464±0.71 2.209±0.01 1.532±0.33 0.701±0.08 0.494±0.00 1.460±0.27 0.996±0.28 1.524±0.32 1.692±0.72 36.193±10.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002PG CIL_0002PG_0002 CGP 5:123876736-123928832
CIL_0002P9 CIL_0002P9_0002 CGP 5:123907175-123969895
CIL_0001EI CIL_0001EI_0002 CGP 5:123927418-124003211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253079 CCDC62-001 protein_coding Homo_sapiens 0 1373
ENST00000341952 CCDC62-002 nonsense_mediated_decay Homo_sapiens 0 1373
ENST00000392440 CCDC62-201 protein_coding Homo_sapiens 0 893
ENST00000392441 CCDC62-005 protein_coding Homo_sapiens 0 1373

Loading