C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCO cytochrome oxidase deficient homolog 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092996 Sco1-001 ENSMUSG00000069844 10090 + 11:67052670-67065572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092996
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092996 0.819±0.00 2.280±0.30 1.384±0.44 0.760±0.00 0.880±0.00 0.772±0.22 1.806±0.88 0.464±0.00 1.128±0.39 1.052±0.29 3.430±0.52 0.199±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005507 IEA copper ion binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008150 ND biological_process
GO:0008535 IEA respiratory chain complex IV assembly
GO:0030016 ISO myofibril

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255390 SCO1-001 protein_coding Homo_sapiens 0 747
ENST00000551045 RP11-474C8.3-001 processed_pseudogene Homo_sapiens 0 508
ENST00000577335 SCO1-006 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000577427 SCO1-002 protein_coding Homo_sapiens 0 422

Loading